EnhancerDB
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  3. rs12048966[chr1:201509207]
Enhancers that have rs12048966[chr1:201509207]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
chr1 201508517 201509575 vista4558
VISTA
Transcript factors that have rs12048966[chr1:201509207]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856607
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856608
chr1 201507652 201509722 POLR2A UCSC Txn Factor no Conserved 107856610
chr1 201508511 201509475 AR GTRD no Prostate (PC-3) 21364574
chr1 201508511 201509475 AR GTRD no Prostate (PC-3) 107856614
chr1 201508639 201509295 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107856616
chr1 201508868 201509658 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107856620
chr1 201509199 201509211 GRHL1 JASPAR yes 34504182
chr1 201509199 201509211 GRHL1 JASPAR yes 118432042
chr1 201509201 201509354 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856621
chr1 201509205 201509209 ESR1 TRANSFAC yes 34504183
chr1 201509205 201509209 ESR1 TRANSFAC yes 118432043
Genes associated with rs12048966[chr1:201509207], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More