EnhancerDB
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  3. rs12054242[chr3:56804257]
Enhancers that have rs12054242[chr3:56804257]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56786742 56805635 enh20640
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs12054242[chr3:56804257]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56804251 56804263 YY1 JASPAR yes 2592595
chr3 56804253 56804264 YY2 JASPAR yes 2592596
chr3 56804254 56804266 HLF JASPAR yes 2592597
Genes associated with rs12054242[chr3:56804257], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More