EnhancerDB
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  3. rs12057222[chr1:16508534]
Enhancers that have rs12057222[chr1:16508534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 16508402 16508642 vista526
VISTA
Transcript factors that have rs12057222[chr1:16508534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16508524 16508542 ESR1 JASPAR yes 27032316
chr1 16508524 16508542 ESR1 JASPAR yes 118238899
chr1 16508526 16508541 ESR2 JASPAR yes 27032317
chr1 16508526 16508541 ESR2 JASPAR yes 118238900
Genes associated with rs12057222[chr1:16508534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 16450832 16482582 - EPHA2 ENSG00000142627.9 16482582 25952 Thyroid 0.00119606 225