EnhancerDB
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  3. rs12057465[chr1:52018484]
Enhancers that have rs12057465[chr1:52018484]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs12057465[chr1:52018484]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52018480 52018490 SP1 JASPAR yes 28849603
chr1 52018482 52018487 SP1 TRANSFAC yes 28849604
chr1 52018484 52018497 NFKB1 JASPAR yes 28849605
chr1 52018484 52018497 NFKB2 JASPAR yes 28849606
Genes associated with rs12057465[chr1:52018484], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More