EnhancerDB
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  3. rs12057716[chr1:229269811]
Enhancers that have rs12057716[chr1:229269811]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs12057716[chr1:229269811]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229269642 229270063 ZNF274 GTRD no Cervix (HeLa-S3) 21390263
chr1 229269674 229274777 ZNF274 GTRD no Liver (HepG2) 21390264
chr1 229269806 229269817 NFKB1 JASPAR yes 35965121
chr1 229269806 229269819 NFKB1 JASPAR yes 35965122
chr1 229269806 229269819 NFKB2 JASPAR yes 35965123
chr1 229269807 229269817 NFKB1 JASPAR yes 35965124
chr1 229269807 229269817 RELA JASPAR yes 35965125
chr1 229269807 229269818 NFKB1 JASPAR yes 35965126
Genes associated with rs12057716[chr1:229269811], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More