EnhancerDB
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  3. rs12059546[chr1:239970097]
Enhancers that have rs12059546[chr1:239970097]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 239967733 239985595 enh12821
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12059546[chr1:239970097]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 239970087 239970102 NFYB JASPAR yes 36538124
chr1 239970089 239970105 NFYA JASPAR yes 36538125
chr1 239970090 239970108 NFYA JASPAR yes 36538126
chr1 239970094 239970098 H1TF2 TRANSFAC yes 36538127
chr1 239970094 239970098 NFE TRANSFAC yes 36538128
chr1 239970094 239970098 SRF TRANSFAC yes 36538129
Genes associated with rs12059546[chr1:239970097], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More