EnhancerDB
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Enhancers that have rs12060122[chr1:172466509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172464365 172471715 enh12373
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Esophagus Muscle (A673) Placenta Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs12060122[chr1:172466509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172466165 172468151 ZBTB33 GTRD no Lung (A549) 107845747
chr1 172466181 172467397 ZBTB33 GTRD no Lung (A549) 107845748
chr1 172466216 172468309 TCF7L2 GTRD no Colon (HCT116) 107845749
chr1 172466217 172468169 ZBTB33 GTRD no Lung (A549) 107845750
chr1 172466221 172467466 ZNF274 GTRD no Bone Marrow (K562) 107845751
chr1 172466236 172466949 ZBTB33 GTRD no Lung (A549) 107845752
chr1 172466245 172467580 P63 GTRD no Skin (Keratinocyte) 107845753
chr1 172466283 172466619 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107845754
chr1 172466292 172466981 ZBTB33 GTRD no Lung (A549) 107845755
chr1 172466310 172468298 TCF7L2 GTRD no Colon (HCT116) 107845756
chr1 172466318 172466888 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21350032
chr1 172466318 172466888 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107845757
chr1 172466322 172466676 ZBTB33 GTRD no Lung (A549) 107845758
chr1 172466323 172466573 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107845759
chr1 172466331 172466571 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107845760
chr1 172466365 172466895 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350033
chr1 172466365 172466895 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845761
chr1 172466376 172466787 ZNF274 GTRD no Liver (HepG2) 107845762
chr1 172466416 172467402 ZBTB33 GTRD no Lung (A549) 107845763
chr1 172466454 172468088 ZBTB33 GTRD no Lung (A549) 107845764
chr1 172466486 172466782 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21350034
chr1 172466486 172466782 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107845765
chr1 172466495 172466831 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21350035
chr1 172466495 172466831 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107845766
chr1 172466496 172466514 SRF JASPAR yes 33133511
Genes associated with rs12060122[chr1:172466509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More