EnhancerDB
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  3. rs12061438[chr1:185621796]
Enhancers that have rs12061438[chr1:185621796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12061438[chr1:185621796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185621523 185621813 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21359474
chr1 185621576 185621806 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21359476
chr1 185621579 185621809 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21359477
chr1 185621580 185621830 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21359478
chr1 185621581 185621805 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21359479
chr1 185621786 185621801 MEF2C JASPAR yes 33830968
chr1 185621791 185621806 MEF2C JASPAR yes 33830969
chr1 185621795 185621801 TBP TRANSFAC yes 33830970
Genes associated with rs12061438[chr1:185621796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More