EnhancerDB
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  3. rs12062911[chr1:22236012]
Enhancers that have rs12062911[chr1:22236012]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22216373 22262695 enh11593
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12062911[chr1:22236012]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22235832 22237021 TCF7L2 GTRD no Colon (HCT116) 107802379
chr1 22236000 22236021 REST JASPAR yes 27330615
chr1 22236000 22236021 REST JASPAR yes 118247382
chr1 22236010 22236024 IRF8 JASPAR yes 27330618
Genes associated with rs12062911[chr1:22236012], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More