EnhancerDB
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  3. rs12063332[chr1:16519901]
Enhancers that have rs12063332[chr1:16519901]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12063332[chr1:16519901]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16519884 16519905 IRF1 JASPAR yes 27034276
chr1 16519891 16519902 PROP1 JASPAR yes 27034277
chr1 16519892 16519904 MEF2A JASPAR yes 27034278
chr1 16519896 16519907 DUX4 JASPAR yes 27034279
chr1 16519896 16519907 PHOX2A JASPAR yes 27034280
chr1 16519896 16519907 PROP1 JASPAR yes 27034281
chr1 16519900 16519913 DUXA JASPAR yes 27034282
chr1 16519901 16519912 DUX4 JASPAR yes 27034283
chr1 16519901 16519912 PHOX2A JASPAR yes 27034284
chr1 16519901 16519912 PROP1 JASPAR yes 27034285
Genes associated with rs12063332[chr1:16519901], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More