EnhancerDB
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  3. rs12069774[chr1:229341116]
Enhancers that have rs12069774[chr1:229341116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229330645 229348935 enh12763
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Ovary Blood (T-cell) Esophagus Brain (SK-N-MC) Stomach Muscle (A673) Placenta Uterus Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs12069774[chr1:229341116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229340812 229343905 ZNF143 GTRD no Epithelial (MCF-7) 21390638
chr1 229340812 229343905 ZNF143 GTRD no Epithelial (MCF-7) 107877861
chr1 229341028 229342660 ZNF274 GTRD no Bone Marrow (K562) 107877862
chr1 229341052 229342362 ZNF274 GTRD no Bone Marrow (K562) 107877863
chr1 229341096 229341581 TCF7L2 GTRD no Colon (HCT116) 107877864
chr1 229341098 229341750 ZNF274 GTRD no Liver (HepG2) 21390639
chr1 229341098 229341750 ZNF274 GTRD no Liver (HepG2) 107877865
chr1 229341103 229342642 ZNF274 GTRD no Bone Marrow (K562) 107877866
chr1 229341112 229343660 ZNF274 GTRD no Bone Marrow (K562) 107877867
chr1 229341112 229343833 ZNF274 GTRD no Bone Marrow (K562) 107877868
chr1 229341115 229343944 ZNF274 GTRD no Bone Marrow (K562) 107877869
chr1 229341116 229341121 SP1 TRANSFAC yes 35974079
Genes associated with rs12069774[chr1:229341116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More