EnhancerDB
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  3. rs12070364[chr1:223916059]
Enhancers that have rs12070364[chr1:223916059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12070364[chr1:223916059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223916054 223916069 RUNX2 JASPAR yes 35673454
chr1 223916057 223916068 RUNX1 JASPAR yes 35673455
chr1 223916057 223916069 GLI2 JASPAR yes 35673456
chr1 223916058 223916068 RUNX3 JASPAR yes 35673457
chr1 223916059 223916068 RUNX2 JASPAR yes 35673458
Genes associated with rs12070364[chr1:223916059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More