EnhancerDB
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  3. rs12071866[chr1:209589064]
Enhancers that have rs12071866[chr1:209589064]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12071866[chr1:209589064]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209587280 209589178 ZNF274 GTRD no Cervix (HeLa-S3) 21375313
chr1 209588329 209589428 ZNF274 GTRD no Cervix (HeLa-S3) 21375371
chr1 209588329 209589428 ZNF274 GTRD no Cervix (HeLa-S3) 107865764
chr1 209589058 209589069 HOXC13 JASPAR yes 34973708
chr1 209589059 209589069 HOXA13 JASPAR yes 34973709
chr1 209589059 209589069 HOXB13 JASPAR yes 34973710
chr1 209589059 209589069 HOXD13 JASPAR yes 34973711
chr1 209589061 209589065 TEAD2 TRANSFAC yes 34973712
chr1 209589061 209589066 TBP TRANSFAC yes 34973713
chr1 209589061 209589067 TFIID TRANSFAC yes 34973714
Genes associated with rs12071866[chr1:209589064], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More