EnhancerDB
  1. Home
  2. SNP
  3. rs12076549[chr1:92201699]
Enhancers that have rs12076549[chr1:92201699]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 92194873 92223455 enh12035
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Spleen Liver (HepG2) Lung Heart
Transcript factors that have rs12076549[chr1:92201699]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 92201695 92201703 ISX JASPAR yes 30718583
chr1 92201695 92201703 LHX9 JASPAR yes 30718584
chr1 92201695 92201703 LMX1B JASPAR yes 30718585
chr1 92201695 92201703 PRRX1 JASPAR yes 30718586
chr1 92201695 92201703 RAX2 JASPAR yes 30718587
chr1 92201695 92201703 SHOX JASPAR yes 30718588
chr1 92201695 92201703 UNCX JASPAR yes 30718589
chr1 92201698 92201708 HESX1 JASPAR yes 30718590
chr1 92201698 92201708 RAX JASPAR yes 30718591
chr1 92201699 92201707 ISX JASPAR yes 30718592
chr1 92201699 92201707 LHX9 JASPAR yes 30718593
chr1 92201699 92201707 LMX1B JASPAR yes 30718594
chr1 92201699 92201707 PRRX1 JASPAR yes 30718595
chr1 92201699 92201707 RAX2 JASPAR yes 30718596
chr1 92201699 92201707 SHOX JASPAR yes 30718597
chr1 92201699 92201707 UNCX JASPAR yes 30718598
Genes associated with rs12076549[chr1:92201699], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 92940319 92952433 - GFI1 ENSG00000162676.7 92952433 738620 Breast 0.25915 898