EnhancerDB
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  3. rs12077108[chr1:185617040]
Enhancers that have rs12077108[chr1:185617040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12077108[chr1:185617040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185616758 185617088 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21359471
chr1 185617035 185617048 SMAD2 JASPAR yes 33830318
Genes associated with rs12077108[chr1:185617040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More