EnhancerDB
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  3. rs12080234[chr1:27459751]
Enhancers that have rs12080234[chr1:27459751]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12080234[chr1:27459751]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27459741 27459756 RUNX2 JASPAR yes 27679981
chr1 27459750 27459761 CEBPB JASPAR yes 27679982
chr1 27459750 27459763 ATF4 JASPAR yes 27679983
chr1 27459751 27459764 JUN JASPAR yes 27679984
Genes associated with rs12080234[chr1:27459751], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More