EnhancerDB
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  3. rs12082870[chr1:54829824]
Enhancers that have rs12082870[chr1:54829824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs12082870[chr1:54829824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54829815 54829825 HOXA13 JASPAR yes 28978074
chr1 54829815 54829825 HOXB13 JASPAR yes 28978075
chr1 54829815 54829825 HOXD13 JASPAR yes 28978076
chr1 54829815 54829826 HOXA10 JASPAR yes 28978077
chr1 54829816 54829825 CDX1 JASPAR yes 28978078
Genes associated with rs12082870[chr1:54829824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More