EnhancerDB
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  3. rs12085607[chr1:55042034]
Enhancers that have rs12085607[chr1:55042034]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12085607[chr1:55042034]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55042034 55042046 HES5 JASPAR yes 28994599
chr1 55042034 55042046 HES7 JASPAR yes 28994600
chr1 55042034 55042046 PKNOX2 JASPAR yes 28994601
Genes associated with rs12085607[chr1:55042034], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More