EnhancerDB
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  3. rs12088281[chr1:54832929]
Enhancers that have rs12088281[chr1:54832929]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs12088281[chr1:54832929]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54832913 54832929 ZNF143 JASPAR yes 28978531
chr1 54832924 54832930 SP1 TRANSFAC yes 28978535
chr1 54832926 54832931 SP1 TRANSFAC yes 28978536
Genes associated with rs12088281[chr1:54832929], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More