EnhancerDB
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  3. rs12090682[chr1:28739119]
Enhancers that have rs12090682[chr1:28739119]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12090682[chr1:28739119]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28739115 28739125 TBX21 JASPAR yes 27767742
chr1 28739115 28739128 EOMES JASPAR yes 27767743
Genes associated with rs12090682[chr1:28739119], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More