EnhancerDB
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  3. rs12092548[chr1:201421705]
Enhancers that have rs12092548[chr1:201421705]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12092548[chr1:201421705]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201421579 201423197 MEF2B GTRD no Blood (Karpas-422) 21364046
chr1 201421614 201422613 ZNF143 GTRD no Epithelial (MCF-7) 21364047
chr1 201421687 201421707 RREB1 JASPAR yes 34495071
chr1 201421688 201421709 IRF1 JASPAR yes 34495072
chr1 201421689 201421709 RREB1 JASPAR yes 34495073
chr1 201421698 201421712 STAT1 JASPAR yes 34495074
chr1 201421699 201421711 IRF1 JASPAR yes 34495075
Genes associated with rs12092548[chr1:201421705], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More