EnhancerDB
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  3. rs12096346[chr1:235034807]
Enhancers that have rs12096346[chr1:235034807]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12096346[chr1:235034807]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235034505 235035604 ZNF274 GTRD no Blood (GM12878) 21400095
chr1 235034507 235035968 ZNF143 GTRD no Epithelial (MCF-7) 21400096
chr1 235034508 235035457 ZNF143 GTRD no Epithelial (MCF-7) 21400097
chr1 235034530 235035778 ZNF274 GTRD no Blood (GM12878) 21400098
chr1 235034546 235035474 ZNF143 GTRD no Epithelial (MCF-7) 21400099
chr1 235034553 235035695 ZNF143 GTRD no Epithelial (MCF-7) 21400100
chr1 235034592 235035260 ZNF274 GTRD no Blood (GM12878) 21400101
chr1 235034604 235035578 ZNF274 GTRD no Blood (GM12878) 21400102
chr1 235034618 235035393 ZNF274 GTRD no Blood (GM12878) 21400103
chr1 235034621 235035634 ZNF274 GTRD no Blood (GM12878) 21400104
chr1 235034625 235035222 ZNF274 GTRD no Liver (HepG2) 21400105
chr1 235034628 235035593 ZNF274 GTRD no Blood (GM12878) 21400106
chr1 235034630 235035217 ZNF143 GTRD no Epithelial (MCF-7) 21400107
chr1 235034631 235035429 ZNF274 GTRD no Blood (GM12878) 21400108
chr1 235034634 235035227 ZNF143 GTRD no Epithelial (MCF-7) 21400109
chr1 235034650 235035465 ZNF274 GTRD no Blood (GM12878) 21400110
chr1 235034660 235035282 ZNF274 GTRD no Liver (HepG2) 21400111
chr1 235034664 235035610 ZNF274 GTRD no Blood (GM12878) 21400112
chr1 235034679 235035428 ZNF274 GTRD no Blood (GM12878) 21400113
chr1 235034701 235035105 ZNF143 GTRD no Epithelial (MCF-7) 21400114
chr1 235034704 235035356 ZNF274 GTRD no Blood (GM12878) 21400115
chr1 235034706 235035244 ZNF274 GTRD no Blood (GM12878) 21400116
chr1 235034706 235035370 ZNF274 GTRD no Blood (GM12878) 21400117
chr1 235034708 235035579 ZNF274 GTRD no Blood (GM12878) 21400118
chr1 235034713 235035155 ZNF274 GTRD no Blood (GM12878) 21400119
chr1 235034714 235035262 ZNF274 GTRD no Liver (HepG2) 21400120
chr1 235034720 235035413 ZNF274 GTRD no Blood (GM12878) 21400121
chr1 235034744 235035347 ZNF274 GTRD no Blood (GM12878) 21400122
chr1 235034766 235035144 ZNF143 GTRD no Epithelial (MCF-7) 21400123
chr1 235034769 235035232 ZNF143 GTRD no Epithelial (MCF-7) 21400124
chr1 235034769 235035259 ZNF274 GTRD no Bone Marrow (K562) 21400125
chr1 235034781 235035346 ZNF274 GTRD no Blood (GM12878) 21400126
chr1 235034797 235035469 ZNF274 GTRD no Blood (GM12878) 21400127
chr1 235034801 235035190 ZNF143 GTRD no Epithelial (MCF-7) 21400128
chr1 235034802 235035257 ZNF274 GTRD no Blood (GM12878) 21400129
chr1 235034802 235035545 ZNF274 GTRD no Blood (GM12878) 21400130
chr1 235034803 235034812 TFAP2A JASPAR yes 36327596
Genes associated with rs12096346[chr1:235034807], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More