EnhancerDB
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  3. rs12099979[chr12:56454989]
Enhancers that have rs12099979[chr12:56454989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 56438391 56456078 enh2386
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs12099979[chr12:56454989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 56454538 56454997 ZNF274 GTRD no Bone Marrow (K562) 21551057
chr12 56454538 56455116 ZNF274 GTRD no Bone Marrow (K562) 21551058
chr12 56454986 56455007 IRF1 JASPAR yes 121089758
chr12 56454987 56455002 FOXP1 JASPAR yes 121089759
chr12 56454987 56455008 IRF1 JASPAR yes 121089760
chr12 56454988 56455003 STAT2 JASPAR yes 121089761
Genes associated with rs12099979[chr12:56454989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More