EnhancerDB
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  3. rs12103872[chr17:62955648]
Enhancers that have rs12103872[chr17:62955648]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12103872[chr17:62955648]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62952883 62958112 ZNF143 GTRD no Epithelial (MCF-7) 21779990
chr17 62953744 62957520 ZNF143 GTRD no Epithelial (MCF-7) 21779992
chr17 62954118 62958130 ZNF143 GTRD no Epithelial (MCF-7) 21779997
chr17 62954223 62957434 ZNF143 GTRD no Epithelial (MCF-7) 21779998
chr17 62954931 62957350 ZNF143 GTRD no Epithelial (MCF-7) 21780000
chr17 62955084 62956769 ZNF143 GTRD no Epithelial (MCF-7) 21780001
chr17 62955250 62956499 ZNF143 GTRD no Epithelial (MCF-7) 21780002
chr17 62955301 62955681 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21780003
chr17 62955384 62956504 ZNF143 GTRD no Epithelial (MCF-7) 21780004
chr17 62955405 62955745 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21780005
chr17 62955457 62955681 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21780006
chr17 62955471 62955682 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21780007
chr17 62955487 62955664 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21780008
chr17 62955499 62957071 ZNF143 GTRD no Epithelial (MCF-7) 21780009
chr17 62955505 62956991 ZNF143 GTRD no Epithelial (MCF-7) 21780010
chr17 62955518 62956567 ZNF143 GTRD no Epithelial (MCF-7) 21780011
chr17 62955533 62956751 ZNF143 GTRD no Epithelial (MCF-7) 21780012
chr17 62955572 62956433 ZNF143 GTRD no Epithelial (MCF-7) 21780013
chr17 62955634 62955649 HNF1A JASPAR yes 55331241
chr17 62955635 62955648 HNF1B JASPAR yes 55331242
chr17 62955635 62955649 POU4F1 JASPAR yes 55331243
chr17 62955635 62955651 POU4F2 JASPAR yes 55331244
chr17 62955635 62955651 POU4F3 JASPAR yes 55331245
Genes associated with rs12103872[chr17:62955648], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More