EnhancerDB
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  3. rs12105313[chr2:69138171]
Enhancers that have rs12105313[chr2:69138171]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 69131784 69143115 enh5635
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12105313[chr2:69138171]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 69138162 69138172 ALX3 JASPAR yes 74807578
chr2 69138162 69138172 GSX1 JASPAR yes 74807579
chr2 69138162 69138172 GSX2 JASPAR yes 74807580
chr2 69138162 69138172 HOXB2 JASPAR yes 74807581
chr2 69138162 69138172 HOXB3 JASPAR yes 74807582
chr2 69138162 69138172 MEOX2 JASPAR yes 74807583
chr2 69138162 69138172 MIXL1 JASPAR yes 74807584
chr2 69138162 69138172 MNX1 JASPAR yes 74807585
chr2 69138163 69138171 DLX6 JASPAR yes 74807586
chr2 69138163 69138171 EN1 JASPAR yes 74807587
chr2 69138163 69138171 LBX1 JASPAR yes 74807588
chr2 69138163 69138171 PAX4 JASPAR yes 74807589
chr2 69138163 69138171 PDX1 JASPAR yes 74807590
chr2 69138163 69138171 VAX1 JASPAR yes 74807591
chr2 69138163 69138171 VAX2 JASPAR yes 74807592
chr2 69138163 69138171 VSX1 JASPAR yes 74807593
chr2 69138163 69138171 VSX2 JASPAR yes 74807594
chr2 69138169 69138184 STAT2 JASPAR yes 74807595
Genes associated with rs12105313[chr2:69138171], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More