EnhancerDB
  1. Home
  2. SNP
  3. rs12122427[chr1:227016506]
Enhancers that have rs12122427[chr1:227016506]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 227014699 227016924 vista142
VISTA
Transcript factors that have rs12122427[chr1:227016506]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227016495 227016510 STAT2 JASPAR yes 35849332
chr1 227016495 227016510 STAT2 JASPAR yes 71160247
chr1 227016502 227016506 YY1 TRANSFAC yes 35849333
chr1 227016502 227016506 YY1 TRANSFAC yes 71160248
chr1 227016503 227016518 FOXP1 JASPAR yes 35849334
chr1 227016503 227016518 FOXP1 JASPAR yes 71160249
chr1 227016505 227016521 POU4F2 JASPAR yes 35849335
chr1 227016505 227016521 POU4F3 JASPAR yes 35849336
chr1 227016505 227016521 POU4F2 JASPAR yes 71160250
chr1 227016505 227016521 POU4F3 JASPAR yes 71160251
Genes associated with rs12122427[chr1:227016506], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More