EnhancerDB
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  3. rs12122912[chr1:55048696]
Enhancers that have rs12122912[chr1:55048696]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12122912[chr1:55048696]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55048685 55048702 PAX1 JASPAR yes 28995518
chr1 55048685 55048702 PAX9 JASPAR yes 28995519
chr1 55048690 55048701 GCM1 JASPAR yes 28995520
chr1 55048691 55048701 GCM2 JASPAR yes 28995521
Genes associated with rs12122912[chr1:55048696], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More