EnhancerDB
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  3. rs12124420[chr1:225959449]
Enhancers that have rs12124420[chr1:225959449]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12124420[chr1:225959449]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225959358 225959471 ZNF274 GTRD no Liver (HepG2) 21385891
chr1 225959435 225959454 PITX2 TRANSFAC yes 35770346
chr1 225959441 225959454 ZBTB18 JASPAR yes 35770347
chr1 225959442 225959454 PKNOX1 JASPAR yes 35770348
chr1 225959442 225959454 TGIF1 JASPAR yes 35770349
chr1 225959443 225959452 SNAI2 JASPAR yes 35770350
chr1 225959443 225959453 FIGLA JASPAR yes 35770351
chr1 225959443 225959453 ID4 JASPAR yes 35770352
chr1 225959443 225959453 TCF3 JASPAR yes 35770353
chr1 225959443 225959453 TCF4 JASPAR yes 35770354
chr1 225959445 225959454 ZEB1 JASPAR yes 35770355
chr1 225959445 225959455 TBX21 JASPAR yes 35770356
chr1 225959446 225959454 MGA JASPAR yes 35770357
chr1 225959446 225959454 TBX15 JASPAR yes 35770358
chr1 225959446 225959454 TBX1 JASPAR yes 35770359
chr1 225959446 225959454 TBX4 JASPAR yes 35770360
chr1 225959446 225959454 TBX5 JASPAR yes 35770361
chr1 225959446 225959456 TBR1 JASPAR yes 35770362
chr1 225959446 225959459 SMAD2 JASPAR yes 35770363
Genes associated with rs12124420[chr1:225959449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More