EnhancerDB
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  3. rs12124423[chr1:225654273]
Enhancers that have rs12124423[chr1:225654273]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12124423[chr1:225654273]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225650829 225656613 ZBTB33 GTRD no Lung (A549) 107874230
chr1 225651124 225656651 ZBTB33 GTRD no Lung (A549) 107874231
chr1 225651156 225656546 ZBTB33 GTRD no Lung (A549) 107874232
chr1 225651177 225654374 ZBTB33 GTRD no Brain (SK-N-SH) 21384819
chr1 225651333 225654603 ZBTB33 GTRD no Brain (SK-N-SH) 21384826
chr1 225651356 225654907 ZBTB33 GTRD no Lung (A549) 107874233
chr1 225651415 225654922 ZBTB33 GTRD no Lung (A549) 107874234
chr1 225651543 225654917 ZBTB33 GTRD no Lung (A549) 107874235
chr1 225651552 225654335 ZBTB33 GTRD no Brain (SK-N-SH) 21384836
chr1 225651913 225654315 ZBTB33 GTRD no Brain (SK-N-SH) 21384848
chr1 225651972 225654359 ZNF274 GTRD no Liver (HepG2) 21384853
chr1 225652156 225654713 ZNF143 GTRD no Epithelial (MCF-7) 21384861
chr1 225652193 225654287 TCF7L2 GTRD no Colon (HCT116) 21384862
chr1 225652309 225654340 TCF7L2 GTRD no Colon (HCT116) 21384869
chr1 225652886 225654273 ZBTB33 GTRD no Brain (SK-N-SH) 21384917
chr1 225653367 225654606 ZNF274 GTRD no Liver (HepG2) 21384957
chr1 225653551 225654716 ZBTB33 GTRD no Brain (SK-N-SH) 21384968
chr1 225653604 225654556 ZNF274 GTRD no Liver (HepG2) 21384971
chr1 225654258 225654273 FOXP1 JASPAR yes 35744109
chr1 225654258 225654279 IRF1 JASPAR yes 35744110
chr1 225654259 225654274 FOXP1 JASPAR yes 35744111
chr1 225654259 225654280 IRF1 JASPAR yes 35744112
chr1 225654260 225654275 FOXP1 JASPAR yes 35744113
chr1 225654260 225654281 IRF1 JASPAR yes 35744114
chr1 225654261 225654276 FOXP1 JASPAR yes 35744115
chr1 225654261 225654282 IRF1 JASPAR yes 35744116
chr1 225654262 225654277 FOXP1 JASPAR yes 35744117
chr1 225654262 225654283 IRF1 JASPAR yes 35744118
chr1 225654263 225654278 FOXP1 JASPAR yes 35744119
chr1 225654265 225654280 FOXP1 JASPAR yes 35744120
chr1 225654266 225654287 IRF1 JASPAR yes 35744121
chr1 225654267 225654282 FOXP1 JASPAR yes 35744122
chr1 225654268 225654803 ZNF274 GTRD no Liver (HepG2) 21384976
chr1 225654270 225654284 SPIC JASPAR yes 35744123
chr1 225654270 225654284 STAT1 JASPAR yes 35744124
chr1 225654270 225654285 PRDM1 JASPAR yes 35744125
chr1 225654270 225654285 STAT2 JASPAR yes 35744126
chr1 225654270 225654291 IRF1 JASPAR yes 35744127
chr1 225654272 225654293 IRF1 JASPAR yes 35744128
Genes associated with rs12124423[chr1:225654273], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More