EnhancerDB
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  3. rs12124438[chr1:235243819]
Enhancers that have rs12124438[chr1:235243819]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235240345 235251255 enh12800
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12124438[chr1:235243819]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235243798 235243819 IRF1 JASPAR yes 36349091
chr1 235243802 235243823 IRF1 JASPAR yes 36349100
chr1 235243804 235243825 IRF1 JASPAR yes 36349101
chr1 235243806 235243827 ZNF263 JASPAR yes 36349102
chr1 235243810 235243831 ZNF263 JASPAR yes 36349103
chr1 235243811 235243832 IRF1 JASPAR yes 36349104
chr1 235243812 235243827 FOXP1 JASPAR yes 36349105
chr1 235243815 235243829 STAT1 JASPAR yes 36349106
chr1 235243815 235243830 STAT2 JASPAR yes 36349107
chr1 235243815 235243836 IRF1 JASPAR yes 36349108
chr1 235243819 235243840 IRF1 JASPAR yes 36349109
Genes associated with rs12124438[chr1:235243819], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More