EnhancerDB
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  3. rs12127040[chr1:225630413]
Enhancers that have rs12127040[chr1:225630413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12127040[chr1:225630413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225630406 225630415 HIC2 JASPAR yes 35740593
chr1 225630408 225630418 SP1 JASPAR yes 35740594
chr1 225630409 225630413 LFA1 TRANSFAC yes 35740595
Genes associated with rs12127040[chr1:225630413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More