EnhancerDB
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  3. rs12127440[chr1:227013329]
Enhancers that have rs12127440[chr1:227013329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12127440[chr1:227013329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227013064 227013448 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387717
chr1 227013175 227013439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387718
chr1 227013187 227013421 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387719
chr1 227013202 227013466 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387720
chr1 227013321 227013332 TFAP2A JASPAR yes 35848856
chr1 227013321 227013332 TFAP2B JASPAR yes 35848857
chr1 227013321 227013332 TFAP2C JASPAR yes 35848858
chr1 227013322 227013331 TFAP2A JASPAR yes 35848859
Genes associated with rs12127440[chr1:227013329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More