EnhancerDB
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  3. rs12131599[chr1:52018650]
Enhancers that have rs12131599[chr1:52018650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs12131599[chr1:52018650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52018637 52018652 FOXP1 JASPAR yes 28849631
chr1 52018638 52018653 STAT2 JASPAR yes 28849632
chr1 52018639 52018654 FOXP1 JASPAR yes 28849633
chr1 52018641 52018653 FOXC2 JASPAR yes 28849634
chr1 52018642 52018653 FOXP2 JASPAR yes 28849635
Genes associated with rs12131599[chr1:52018650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More