EnhancerDB
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  3. rs12134709[chr1:35312649]
Enhancers that have rs12134709[chr1:35312649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 35306394 35321215 enh226
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Esophagus Placenta Breast Spleen Prostate (RWPE1) Lung Heart
Transcript factors that have rs12134709[chr1:35312649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 35312639 35312652 SMAD2 JASPAR yes 28077826
Genes associated with rs12134709[chr1:35312649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 35258599 35261348 + GJA4 ENSG00000187513.8 35258599 51301 Esophagus 0.132593 487