EnhancerDB
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  3. rs12135653[chr1:185626888]
Enhancers that have rs12135653[chr1:185626888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12135653[chr1:185626888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185626832 185627819 ZNF143 GTRD no Epithelial (MCF-7) 21359483
chr1 185626867 185626888 ZNF263 JASPAR yes 33831920
chr1 185626870 185626891 IRF1 JASPAR yes 33831921
chr1 185626871 185626892 ZNF263 JASPAR yes 33831922
chr1 185626874 185626895 ZNF263 JASPAR yes 33831924
chr1 185626876 185626897 IRF1 JASPAR yes 33831925
chr1 185626877 185626898 ZNF263 JASPAR yes 33831926
chr1 185626878 185626893 PRDM1 JASPAR yes 33831927
chr1 185626880 185626901 ZNF263 JASPAR yes 33831928
chr1 185626881 185626902 ZNF263 JASPAR yes 33831929
chr1 185626884 185626899 PRDM1 JASPAR yes 33831930
chr1 185626884 185626899 STAT2 JASPAR yes 33831931
chr1 185626884 185626905 ZNF263 JASPAR yes 33831932
chr1 185626885 185626906 ZNF263 JASPAR yes 33831933
chr1 185626885 185627833 ZNF143 GTRD no Epithelial (MCF-7) 21359484
chr1 185626888 185626909 ZNF263 JASPAR yes 33831934
Genes associated with rs12135653[chr1:185626888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More