EnhancerDB
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Enhancers that have rs12135673[chr1:8963453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8954605 8983075 enh11478
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs12135673[chr1:8963453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8963438 8963453 ESR2 JASPAR yes 26606561
chr1 8963441 8963455 JUN JASPAR yes 26606562
chr1 8963444 8963455 FOSL2 JASPAR yes 26606563
chr1 8963444 8963455 JUNB JASPAR yes 26606564
chr1 8963445 8963456 FOS JASPAR yes 26606565
chr1 8963445 8963456 FOSL1 JASPAR yes 26606566
chr1 8963445 8963456 JUND JASPAR yes 26606567
chr1 8963445 8963456 NFE2 JASPAR yes 26606568
chr1 8963446 8963453 JUN TRANSFAC yes 26606569
chr1 8963446 8963455 JDP2 JASPAR yes 26606570
chr1 8963446 8963457 FOSL2 JASPAR yes 26606571
chr1 8963446 8963457 JUNB JASPAR yes 26606572
chr1 8963446 8963459 SMAD2 JASPAR yes 26606573
chr1 8963446 8963460 JUN JASPAR yes 26606574
chr1 8963449 8963459 TBR1 JASPAR yes 26606575
chr1 8963449 8963460 TBX2 JASPAR yes 26606576
chr1 8963450 8963460 TBX21 JASPAR yes 26606577
chr1 8963451 8963459 MGA JASPAR yes 26606578
chr1 8963451 8963459 TBX15 JASPAR yes 26606579
chr1 8963451 8963459 TBX1 JASPAR yes 26606580
chr1 8963451 8963459 TBX4 JASPAR yes 26606581
chr1 8963451 8963459 TBX5 JASPAR yes 26606582
chr1 8963451 8963460 ZEB1 JASPAR yes 26606583
chr1 8963451 8963463 PKNOX1 JASPAR yes 26606584
chr1 8963451 8963463 TGIF1 JASPAR yes 26606585
chr1 8963451 8963464 ZBTB18 JASPAR yes 26606586
chr1 8963452 8963462 FIGLA JASPAR yes 26606587
chr1 8963452 8963462 ID4 JASPAR yes 26606588
chr1 8963452 8963462 TCF3 JASPAR yes 26606589
chr1 8963452 8963462 TCF4 JASPAR yes 26606590
chr1 8963453 8963462 SNAI2 JASPAR yes 26606591
Genes associated with rs12135673[chr1:8963453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More