EnhancerDB
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  3. rs12136830[chr1:2189196]
Enhancers that have rs12136830[chr1:2189196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12136830[chr1:2189196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2188814 2190965 TCF7L2 GTRD no Colon (HCT116) 107801816
chr1 2189183 2189198 MEF2A JASPAR yes 26228239
chr1 2189184 2189199 MEF2C JASPAR yes 26228240
Genes associated with rs12136830[chr1:2189196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More