EnhancerDB
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  3. rs12138302[chr1:212090071]
Enhancers that have rs12138302[chr1:212090071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs12138302[chr1:212090071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212088998 212090496 ZNF274 GTRD no Blood (GM12878) 21377511
chr1 212089084 212090334 ZNF274 GTRD no Blood (GM12878) 21377512
chr1 212089258 212090315 ZNF274 GTRD no Blood (GM12878) 21377513
chr1 212089292 212090079 ZNF274 GTRD no Bone Marrow (K562) 21377514
chr1 212089355 212090185 ZNF274 GTRD no Blood (GM12878) 21377515
chr1 212089355 212090194 ZNF274 GTRD no Blood (GM12878) 21377516
chr1 212089395 212090141 ZNF274 GTRD no Blood (GM12878) 21377517
chr1 212089410 212090104 ZNF274 GTRD no Blood (GM12878) 21377519
chr1 212089410 212090302 ZNF274 GTRD no Blood (GM12878) 21377520
chr1 212089532 212090095 ZNF274 GTRD no Blood (GM12878) 21377527
chr1 212089582 212090118 ZNF274 GTRD no Blood (GM12878) 21377531
chr1 212089608 212090271 ZNF274 GTRD no Blood (GM12878) 21377533
chr1 212090069 212090080 NFE2L2 JASPAR yes 35090983
Genes associated with rs12138302[chr1:212090071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More