EnhancerDB
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  3. rs12143888[chr1:94237370]
Enhancers that have rs12143888[chr1:94237370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94213125 94252475 enh499
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12143888[chr1:94237370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94237354 94237371 RXRA JASPAR yes 30834231
chr1 94237358 94237370 EHF JASPAR yes 30834233
chr1 94237358 94237371 ELF3 JASPAR yes 30834234
chr1 94237359 94237370 ELF5 JASPAR yes 30834235
chr1 94237368 94237372 NFE TRANSFAC yes 30834237
chr1 94237369 94237374 GATA2 JASPAR yes 30834238
Genes associated with rs12143888[chr1:94237370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More