EnhancerDB
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  3. rs1216779[chr1:113570560]
Enhancers that have rs1216779[chr1:113570560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113567665 113592895 enh12156
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs1216779[chr1:113570560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113570030 113570630 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21329842
chr1 113570279 113570603 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21329847
chr1 113570552 113570562 POU6F2 JASPAR yes 31609362
Genes associated with rs1216779[chr1:113570560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More