EnhancerDB
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  3. rs12173347[chr6:35339000]
Enhancers that have rs12173347[chr6:35339000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35320605 35341715 enh9075
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12173347[chr6:35339000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35338990 35339005 HNF4A JASPAR yes 101277482
chr6 35338991 35339005 NR2F1 JASPAR yes 101277483
chr6 35338991 35339006 HNF4G JASPAR yes 101277484
chr6 35338991 35339006 NR2C2 JASPAR yes 101277485
chr6 35338994 35339004 SP1 JASPAR yes 101277486
chr6 35338995 35339005 SP1 JASPAR yes 101277487
chr6 35338997 35339003 NFE2 TRANSFAC yes 101277488
chr6 35338998 35339012 GLIS3 JASPAR yes 101277489
Genes associated with rs12173347[chr6:35339000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More