EnhancerDB
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  3. rs12184272[chr1:113574498]
Enhancers that have rs12184272[chr1:113574498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113567665 113592895 enh12156
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12184272[chr1:113574498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113574480 113574500 ESR1 JASPAR yes 31610010
chr1 113574494 113574504 ID4 JASPAR yes 31610012
chr1 113574494 113574504 TCF3 JASPAR yes 31610013
chr1 113574494 113574504 TCF4 JASPAR yes 31610014
chr1 113574495 113574504 SNAI2 JASPAR yes 31610015
chr1 113574496 113574501 USF2 TRANSFAC yes 31610016
Genes associated with rs12184272[chr1:113574498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More