EnhancerDB
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  3. rs12188498[chr5:154164704]
Enhancers that have rs12188498[chr5:154164704]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 154145125 154165844 enh8815
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12188498[chr5:154164704]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 154164701 154164715 SPI1 JASPAR yes 67058652
chr5 154164701 154164715 SPIC JASPAR yes 67058653
chr5 154164702 154164710 EHF JASPAR yes 67058654
chr5 154164704 154164711 SPIB JASPAR yes 67058655
Genes associated with rs12188498[chr5:154164704], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More