EnhancerDB
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  3. rs12196331[chr6:107179509]
Enhancers that have rs12196331[chr6:107179509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107161265 107207435 enh9283
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12196331[chr6:107179509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107179495 107179510 PRDM1 JASPAR yes 104063494
chr6 107179501 107179517 E2F2 JASPAR yes 104063495
Genes associated with rs12196331[chr6:107179509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More