EnhancerDB
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  3. rs12197489[chr6:107206225]
Enhancers that have rs12197489[chr6:107206225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107161265 107207435 enh9283
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12197489[chr6:107206225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107206225 107206235 TFEC JASPAR yes 104067319
chr6 107206225 107206236 USF1 JASPAR yes 104067320
chr6 107206225 107206236 USF2 JASPAR yes 104067321
Genes associated with rs12197489[chr6:107206225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More