EnhancerDB
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  3. rs12202209[chr6:108960025]
Enhancers that have rs12202209[chr6:108960025]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108935865 108963315 enh23479
Bone Marrow (K562) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Liver Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs12202209[chr6:108960025]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108960011 108960025 SPIC JASPAR yes 104187606
chr6 108960015 108960030 MEF2C JASPAR yes 104187607
chr6 108960023 108960038 NR2C2 JASPAR yes 104187608
chr6 108960024 108960038 RXRB JASPAR yes 104187609
chr6 108960024 108960038 RXRG JASPAR yes 104187610
Genes associated with rs12202209[chr6:108960025], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More