EnhancerDB
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  3. rs12206962[chr6:33573578]
Enhancers that have rs12206962[chr6:33573578]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12206962[chr6:33573578]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33573564 33573585 IRF1 JASPAR yes 101160171
chr6 33573568 33573589 IRF1 JASPAR yes 101160173
chr6 33573569 33573584 FOXP1 JASPAR yes 101160174
chr6 33573569 33573590 IRF1 JASPAR yes 101160175
chr6 33573570 33573591 IRF1 JASPAR yes 101160176
chr6 33573571 33573586 FOXP1 JASPAR yes 101160177
chr6 33573571 33573592 IRF1 JASPAR yes 101160178
chr6 33573572 33573593 IRF1 JASPAR yes 101160179
chr6 33573573 33573588 FOXP1 JASPAR yes 101160180
chr6 33573573 33573594 IRF1 JASPAR yes 101160181
chr6 33573574 33573589 FOXP1 JASPAR yes 101160182
chr6 33573575 33573590 FOXP1 JASPAR yes 101160183
chr6 33573576 33573591 FOXP1 JASPAR yes 101160184
chr6 33573577 33573592 FOXP1 JASPAR yes 101160185
chr6 33573578 33573593 FOXP1 JASPAR yes 101160186
Genes associated with rs12206962[chr6:33573578], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More