EnhancerDB
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  3. rs12209172[chr6:33569206]
Enhancers that have rs12209172[chr6:33569206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12209172[chr6:33569206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33569199 33569209 SREBF1 JASPAR yes 101159538
chr6 33569199 33569209 SREBF2 JASPAR yes 101159539
chr6 33569204 33569215 NFE2L2 JASPAR yes 101159540
Genes associated with rs12209172[chr6:33569206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More