EnhancerDB
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  3. rs12229205[chr12:95746228]
Enhancers that have rs12229205[chr12:95746228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 95726252 95768135 enh2529
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Ovary Brain (SK-N-SH) Esophagus Astrocyte Liver Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs12229205[chr12:95746228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 95746011 95746390 SOX2 GTRD no Neural Stem Cells (H9) 21567044
chr12 95746068 95746463 SOX2 GTRD no Neural Stem Cells (H9) 21567045
chr12 95746068 95746474 SOX2 GTRD no Neural Stem Cells (H9) 21567046
chr12 95746169 95746525 SOX2 GTRD no Neural Stem Cells (H9) 21567047
chr12 95746227 95746240 NR2F1 JASPAR yes 122989236
Genes associated with rs12229205[chr12:95746228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More