EnhancerDB
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  3. rs12229712[chr12:123610263]
Enhancers that have rs12229712[chr12:123610263]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123594465 123621595 enh15080
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12229712[chr12:123610263]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123610251 123610264 SMAD2 JASPAR yes 124321293
chr12 123610259 123610269 ID4 JASPAR yes 124321294
chr12 123610259 123610269 TCF3 JASPAR yes 124321295
chr12 123610259 123610269 TCF4 JASPAR yes 124321296
chr12 123610260 123610269 SNAI2 JASPAR yes 124321297
chr12 123610261 123610266 USF2 TRANSFAC yes 124321298
Genes associated with rs12229712[chr12:123610263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More